Agri-Paper — Manuscript System for Agricultural Science

Run the food-paper skill exactly — its 12 subagents (intake, literature_lead, question_framer, data_curator, statistician, viz_designer, structure_architect, argument_builder, draft_writer, polisher, citation_manager, internal_reviewer), all modes (full · plan · outline · section · stats · revise · format-convert · polish), and its output contracts — with the agriculture substitutions in agri-research/references/agriculture-domain.md. Read that file first. No new machinery here.

The substitutions

1. Persona — a senior agricultural scientist of the specific discipline; name it and write to its standards (domain §2).
2. Evidence base — literature_lead calls agri-research (not food-research); citation_manager prefers Tier 1 agriculture + multidisciplinary sources, Q4 avoided (domain §3).
3. Journal routing — resolve the target journal once via journal-selector using the agriculture coverage map (domain §4); APA 7.0 if 'generic'.

Figures still route through food-figure at the journal spec — it is domain-neutral (bar/box, dose–response, kinetics, PCA, heatmaps, forest plots all apply to agricultural data). Revision still follows food-paper/references/revision-response.md; peer review calls agri-review.

Agricultural reporting (domain §5) — enforce in Methods and Results

• Field trials: site (coordinates), season(s)/years, soil type and classification, cultivar/genotype, plot size, design (RCBD/split-plot/Latin square) and replication, agronomic management, and the statistical model.
• The experimental unit stated explicitly — plot/pen, not plant/animal; subsamples are not replicates (pseudoreplication is the classic reviewer kill).
• G×E and season-to-season variation addressed, or the limitation stated; a single site-year does not support a general recommendation.
• Animal work: ethics approval + ARRIVE; housing, diet composition, unit.
• Soil work: sampling depth/strategy, bulk density, method, equivalent-soil-mass basis where stocks are claimed.
• Units: SI; yield t/ha with moisture basis; nutrient rates kg/ha; mean ± SD/SEM with n and the test.

Inherited unchanged (not optional)

Anti-fabrication grounding + four-gate citations (scripts/verify_citations.py), word-field-codes.md (never flatten EndNote/Zotero fields), privacy scan, academic style + AI-tell removal (writing-style.md with human-writing.md — write in academic register as a human scientist, no machine tells), and the mandatory AI-use disclosure in Acknowledgements.