bio-clip-seq-clip-motif-analysis
SkillDev toolsGives your agent a library of medical AI skills for analyzing biological sequences and motifs.
Available today. Use it from your connected AI after setup.
No other account needed.
Connect ahel once, and every AI you use reads what you have installed.
Then ask your AI: use the bio-clip-seq-clip-motif-analysis skill
About this capability
The largest open-source medical AI skills library for OpenClaw🦞.
What this skill tells your AI
The instructions your AI receives, as published by freedomintelligence/openclaw-medical-skills in skills/bio-clip-seq-clip-motif-analysis/SKILL.md and read by ahel’s review.
name: bio-clip-seq-clip-motif-analysis description: Identify enriched sequence motifs at CLIP-seq binding sites for RBP binding specificity. Use when characterizing the sequence preferences of an RNA-binding protein. tool_type: cli primary_tool: HOMER measurable_outcome: Execute skill workflow successfully with valid output within 15 minutes. allowed-tools:
- read_file
- run_shell_command
CLIP Motif Analysis
HOMER De Novo Motifs
# Extract sequences from peaks
bedtools getfasta -fi genome.fa -bed peaks.bed -fo peaks.fa
# Find enriched motifs
findMotifs.pl peaks.fa fasta output_dir \
-len 6,7,8 \
-rna
MEME-ChIP
meme-chip -oc output_dir \
-dna \
peaks.fa
Known Motif Enrichment
# HOMER known motif scan
findMotifs.pl peaks.fa fasta output_dir \
-rna \
-known
Related Skills
- clip-peak-calling - Get peaks
- chip-seq/motif-analysis - General motif concepts
Signals
- GitHub stars
- 3k
- Forks
- 407
- Last commit
- Jul 2026
Advanced
- Catalog kind
- skill
- Gateway key
bio-clip-seq-clip-motif-analysis- Source
- github.com/freedomintelligence/openclaw-medical-skills