Remove data with forget()

SkillDatabases & data

cognee-forget is a skill that teaches an AI agent to remove data from cognee memory using the forget() API. It covers finding which dataset and document hold the content to delete, reading raw content to confirm what the user means, and then deleting one document, a whole dataset, or only the graph and vector memory while keeping raw files.

Then ask your AI: use the Remove data with forget() skill

Details

Instructions available. Your AI can read the instructions. Execution depends on the setup they require.

Have a working cognee installation and access to the memory you want to change.

What your AI can do with it

  • List datasets the user can read with cognee.datasets.list_datasets()
  • List documents in a dataset with cognee.datasets.list_data(dataset_id)
  • Read raw document content via HTTP or open_data_file to confirm matches
  • Delete one document with forget(data_id=..., dataset_id=...)
  • Delete a whole dataset with forget(dataset="name") or forget(dataset_id=...)

Getting started

  1. Have a working cognee installation and access to the memory you want to change.
  2. Choose how you will call forget(): the Python SDK, the HTTP API, or the CLI.
  3. List datasets to find the one that holds the content to delete.
  4. List the documents in that dataset and read their raw content to confirm the right items.
  5. Confirm the exact items with the user, then call forget() with the matching ids or names.

What this skill tells your AI

The instructions your AI receives, as published by topoteretes/cognee in .agents/skills/cognee-forget/SKILL.md and read by Ahel’s review.

forget() is cognee's one deletion API. It removes one document, a whole dataset, or only the derived memory (graph + vectors) while keeping the raw files. Deletion cannot be undone, so the workflow is always find, read, confirm, then delete.

Hard limits for agents

  • Delete only what the user asked to forget. Identify it by reading the content first; never guess from a file name alone.
  • Confirm the exact items with the user before deleting, unless they already named exact ids.
  • The widest deletion you may run is forget(everything=True), and only when the user explicitly asks to wipe all of their memory. Never use any other reset or wipe mechanism to delete data.

Use it

1. Find the dataset

import cognee

datasets = await cognee.datasets.list_datasets()  # datasets the user can read
for ds in datasets:
    print(ds.id, ds.name)

HTTP: GET /api/v1/datasets. CLI: cognee-cli datasets list.

2. List its documents

items = await cognee.datasets.list_data(dataset_id)  # all Data rows, oldest first
for item in items:
    print(item.id, item.name, item.extension, item.created_at)

HTTP: GET /api/v1/datasets/{dataset_id}/data?limit=100&offset=0 (limit up to 1000; GET .../data/count for the total; example: examples/python/dataset_data_pagination.py). CLI: cognee-cli datasets data <dataset_uuid>.

Each item has id, name, created_at, extension, mime_type, raw_data_location, dataset_id, label, external_metadata (including any node_set), and data_size.

3. Read the content before deciding

Names are often text_<hash>.txt, so read the content to find what the user means.

  • HTTP: GET /api/v1/datasets/{dataset_id}/data/{data_id}/raw returns the stored file (404 if it is gone).
  • SDK: there is no "get raw" helper; open the stored location:
from cognee.infrastructure.files.utils.open_data_file import open_data_file

async with open_data_file(item.raw_data_location, mode="rb") as f:
    preview = f.read(2000).decode("utf-8", errors="replace")

Judge matches by meaning, not only by keywords, and show the user the candidates (name + a short preview) before deleting.

4. Delete

GoalCallWhat remains
One documentforget(data_id=..., dataset_id=...) (or dataset="name")Nothing of that document; shared entities stay while another document still references them
A whole datasetforget(dataset="name") or forget(dataset_id=...)The dataset is deleted outright: the record, its data rows, graph and vector stores, and attributed sessions
Rebuild a dataset's graph laterforget(dataset="name", memory_only=True)Raw files and data rows; graph, vectors, sessions and pipeline status are reset, so the data can be re-processed
One document's memory onlyforget(dataset="name", data_id=..., memory_only=True)That document's raw file and row
Every dataset the user can deleteforget(everything=True)Nothing, in any dataset the user has delete on in the current tenant (shared ones included). Only on explicit request (see the hard limits)

Return values: {"data_id", "dataset_id", "status"} for a document, {"dataset_id", "status"} for a dataset (plus data_records_reset with memory_only), {"datasets_removed", "status"} for everything (datasets_removed counts the datasets the user can read, not the delete set).

HTTP: POST /api/v1/forget with a JSON body; camelCase and snake_case keys both work: {"datasetId": "...", "dataId": "..."}, {"dataset": "name", "memoryOnly": true}, {"everything": true}. Invalid combinations return 422.

CLI: cognee-cli forget --dataset NAME | --dataset-id UUID [--data-id UUID] [--memory-only], or --everything / --all. The CLI does not ask for confirmation; confirm with the user first.

Pitfalls

  • A data_id that is not in the dataset returns success and deletes nothing. The delete path treats an unknown id as a custom-graph-model delete. Always take the id from list_data for that same dataset, and check it is still listed afterwards if it matters.
  • Pass either dataset or dataset_id, not both (ValueError). data_id and memory_only both need a dataset.
  • memory_only is ignored when everything=True in the SDK (the CLI rejects the combination). everything=True always deletes everything.
  • Not found and not allowed look the same. An unknown dataset name and one the user cannot delete both raise DatasetNotFoundError. Deleting needs the delete permission on the dataset (see the cognee-permissions skill). everything=True deletes every dataset the user has delete permission on in the current tenant, including datasets shared to them with delete rights, not only the ones they own.
  • Sessions that cited deleted data are invalidated so recall stops returning answers built on it. Agent-trace entries are not invalidated.
  • Changing a document is not a delete. To replace a document's content, use cognee.update(data_id=..., data=..., dataset_id=...), which keeps its id and re-extracts only the changed parts.
  • cognee.delete() is deprecated; use forget().

How it works

forget() resolves the dataset with the delete permission, then:

  • One document → datasets.delete_data(): takes the dataset lock, deletes the graph nodes and edges the document owns, the matching vectors and edge evidence, invalidates sessions that cited them, then deletes the Data row. Ownership is tracked per document (source-refs on graph elements), so an entity shared by two documents survives until both are deleted. Raw files are reference-counted by storage location.
  • A dataset → datasets.empty_dataset().
  • memory_only → drops the dataset's graph/vector memory and resets its pipeline status, leaving raw data for a rebuild.
  • everything → datasets.delete_all() over every dataset the user has delete on in the current tenant, plus a full prune of the session cache (when caching or usage logging is on). This wipes every user's sessions (Redis FLUSHDB / the whole fs cache / all SQL cache tables), not just this user's.

Key files:

  • cognee/api/v1/forget/forget.py (SDK), routers/get_forget_router.py (HTTP), cognee/cli/commands/forget_command.py (CLI)
  • cognee/api/v1/datasets/datasets.py (list_datasets, list_data, delete_data, empty_dataset, delete_all)
  • cognee/api/v1/datasets/routers/get_datasets_router.py (list, count, raw)
  • cognee/infrastructure/databases/provenance/source_refs.py (per-document ownership of graph elements)
  • cognee/infrastructure/files/utils/open_data_file.py

Extending it

  • Anything new that writes graph nodes or edges for a document must record its source-refs, or forget(data_id=...) cannot find and remove it.
  • Anything new that stores per-document data outside the graph (like edge evidence) needs a cleanup step in the delete path and in memory_only.
  • Unit tests for forget() are in cognee/tests/unit/api/v1/forget/ (argument validation, the HTTP endpoint, memory_only); cover both the document and the memory_only paths for new deletion behaviour.

Signals

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Last commit
Oct 2026

Questions

How do I find which dataset and document hold the content to delete?
List datasets with cognee.datasets.list_datasets(), then list documents in the chosen dataset with cognee.datasets.list_data(dataset_id). Read raw content to confirm what the user means, since names are often text_<hash>.txt.
How do I choose between deleting one document, a whole dataset, or only the graph/vector memory?
Use forget(data_id=..., dataset_id=...) for one document, forget(dataset="name") or forget(dataset_id=...) for a whole dataset, and the graph/vector-only option when you want to keep raw files but remove derived memory.
Advanced
Item type
skill
Key
cognee-forget
Source
github.com/topoteretes/cognee