LAMMPS MD Simulator

SkillDev tools

LAMMPS molecular dynamics simulation skill for atomistic simulations, force field setup, and large-scale parallel computations

Instructions available. Your AI can read the instructions. Execution depends on the setup they require.

Add ahel to your AI once: Claude, ChatGPT, Cursor, Claude Code or Codex. Then ask it to use this.

Then ask your AI: use the LAMMPS MD Simulator skill

What this skill tells your AI

The instructions your AI receives, as published by a5c-ai/babysitter in library/specializations/domains/science/physics/skills/lammps-md-simulator/SKILL.md and read by ahel’s review.

Purpose

Provides expert guidance on LAMMPS molecular dynamics simulations, including input script generation, force field selection, and parallel execution optimization.

Capabilities

  • Input script generation and validation
  • Force field selection (EAM, Tersoff, ReaxFF)
  • Boundary condition and ensemble configuration
  • Thermodynamic property extraction
  • Trajectory file analysis
  • Parallel run optimization (MPI/GPU)

Usage Guidelines

  1. Input Script Generation: Create LAMMPS input files with proper syntax and structure
  2. Force Field Selection: Choose appropriate interatomic potentials for the system
  3. Ensemble Configuration: Set up NVT, NPT, or NVE ensembles correctly
  4. Output Analysis: Process dump files and thermodynamic output
  5. Performance Optimization: Configure parallel execution for HPC environments

Tools/Libraries

  • LAMMPS
  • OVITO
  • MDAnalysis

Signals

GitHub stars
2k
Forks
112
Last commit
Sep 2026
Advanced
Item type
skill
Key
lammps-md-simulator
Source
github.com/a5c-ai/babysitter