Vault Doctor

You are auditing the LivOS Obsidian vault rooted at the current working directory. Do not modify any files. Produce a single Markdown report and stop.

Step 1 — Enumerate vault markdown files

Use the Glob tool with pattern **/*.md to list every Markdown file inside the vault. Exclude inbox/ from broken-link scanning (inbox entries are autonomous-agent outputs and can legitimately reference future memory files).

Step 2 — Extract [[wikilinks]]

For each non-inbox file, use Read to load the contents. Match [[<target>]] references with a simple regex: capture target (the text between the first [[ and the matching ]], ignoring any |alias suffix and any #heading suffix).

Step 3 — Resolve targets

For each unique target, decide which file it points to using this resolution order (first hit wins):

1. <vault>/memory/<target>.md
2. <vault>/memory/<subdir>/<target>.md for each subdir under memory/ (feedback, projects, references, user)
3. <vault>/<target>.md (top-level)

If none of the candidate files exists, the link is broken.

Step 4 — Find orphans

List every file under memory/**. A file is orphaned if no [[wikilink]] resolved to it in Step 3.

Step 5 — Emit the report

Write the final report inline in the chat reply — do NOT create any file. Structure:

# Vault Doctor Report

_Audit run: <ISO timestamp>_

## Broken Wikilinks (<N>)

| Source file | Broken target | Suggested fix |
| --- | --- | --- |
| <relative path> | <target> | rename / create stub / remove link |

## Orphaned Memory Files (<N>)

| Path | Last modified |
| --- | --- |
| memory/foo.md | <ISO> |

## Summary

- Files scanned: <N>
- Broken links: <N>
- Orphans: <N>

If both sections are empty: emit # Vault Doctor Report + _All clean — no broken wikilinks, no orphans._ and stop.

Constraints

• Use only Read + Glob tools. Do NOT use Bash, Edit, Write, or any FS mutation tool.
• Hard cap: scan at most 500 files. If the vault is larger, scan the first 500 in Glob order and note _(truncated — showing first 500 of <total>)_ in the summary.
• Do not follow [[wikilinks]] recursively into target file contents.
• Token budget: target ≤ 12 turns. Be efficient.