MAGeCK CRISPR Analyzer Skill

SkillDev tools

MAGeCK CRISPR screen analysis skill for gene essentiality scoring

Instructions available. Your AI can read the instructions. Execution depends on the setup they require.

Account requirements not reviewed. Check the skill instructions before use; ahel provides instructions and does not run this skill.

Add ahel to your AI once: Claude, ChatGPT, Cursor, Claude Code or Codex. Then ask it to use this.

Then ask your AI: use the MAGeCK CRISPR Analyzer Skill skill

What this skill tells your AI

The instructions your AI receives, as published by a5c-ai/babysitter in library/specializations/domains/science/bioinformatics/skills/mageck-crispr-analyzer/SKILL.md and read by ahel’s review.

Purpose

Provide MAGeCK CRISPR screen analysis for gene essentiality scoring.

Capabilities

Guide read counting
Normalization and QC
Gene-level analysis
Pathway enrichment
MLE model for complex designs
Visualization outputs

Usage Guidelines

Count guides accurately from sequencing data
Normalize counts appropriately
Calculate gene-level scores
Enrich for biological pathways
Use MLE for complex experimental designs
Generate informative visualizations

Dependencies

MAGeCK
BAGEL
CRISPResso2

Process Integration

CRISPR Screen Analysis (crispr-screen-analysis)

Signals

GitHub stars: 2k
Forks: 112
Last commit: Sep 2026

Advanced

Item type: skill
Key: mageck-crispr-analyzer
Source: github.com/a5c-ai/babysitter

github.com/a5c-ai/babysitter