PubMed Literature Miner

SkillDev tools

Biomedical literature mining using PubMed/MEDLINE for systematic review support

Instructions available. Your AI can read the instructions. Execution depends on the setup they require.

Account requirements not reviewed. Check the skill instructions before use; ahel provides instructions and does not run this skill.

Add ahel to your AI once: Claude, ChatGPT, Cursor, Claude Code or Codex. Then ask it to use this.

Then ask your AI: use the PubMed Literature Miner skill

What this skill tells your AI

The instructions your AI receives, as published by a5c-ai/babysitter in library/specializations/domains/science/scientific-discovery/skills/pubmed-literature-miner/SKILL.md and read by ahel’s review.

Purpose

Provides biomedical literature mining capabilities using PubMed/MEDLINE for systematic review support and PICO framework analysis.

Capabilities

MeSH term-based search
PICO element extraction
Abstract screening automation
Citation deduplication
PRISMA flow diagram data generation
Full-text retrieval coordination

Usage Guidelines

MeSH Terms: Use controlled vocabulary for precise searches
PICO Framework: Structure searches around population, intervention, comparison, outcome
Screening: Apply inclusion/exclusion criteria systematically
PRISMA Compliance: Generate required flow diagram data

Tools/Libraries

Biopython
PyMed
NCBI E-utilities

Signals

GitHub stars: 2k
Forks: 112
Last commit: Sep 2026

Advanced

Item type: skill
Key: pubmed-literature-miner
Source: github.com/a5c-ai/babysitter

github.com/a5c-ai/babysitter