RDKit Chemoinformatics Skill

SkillDev tools

RDKit chemoinformatics skill for molecular property calculation and compound library management

Instructions available. Your AI can read the instructions. Execution depends on the setup they require.

Add ahel to your AI once: Claude, ChatGPT, Cursor, Claude Code or Codex. Then ask it to use this.

Then ask your AI: use the RDKit Chemoinformatics Skill skill

What this skill tells your AI

The instructions your AI receives, as published by a5c-ai/babysitter in library/specializations/domains/science/bioinformatics/skills/rdkit-chemoinformatics/SKILL.md and read by ahel’s review.

Purpose

Provide RDKit chemoinformatics for molecular property calculation and compound library management.

Capabilities

  • Molecular descriptor calculation
  • SMILES/InChI handling
  • Substructure searching
  • Fingerprint generation
  • ADMET property prediction
  • Compound library filtering

Usage Guidelines

  • Standardize molecular representations
  • Calculate relevant descriptors for analysis
  • Use fingerprints for similarity searching
  • Filter libraries by drug-like properties
  • Predict ADMET properties for prioritization
  • Document descriptor and fingerprint types

Dependencies

  • RDKit
  • Open Babel
  • ChEMBL

Process Integration

  • Molecular Docking and Virtual Screening (molecular-docking)

Signals

GitHub stars
2k
Forks
112
Last commit
Sep 2026
Advanced
Item type
skill
Key
rdkit-chemoinformatics
Source
github.com/a5c-ai/babysitter