Referee Response Assistant

SkillDev tools

Helps your agent draft and format point-by-point responses to academic referee reports for journal revisions.

Available today. Use it from your connected AI after setup.

Connect ahel once, and every AI you use reads what you have installed.

Then ask your AI: use the Referee Response Assistant skill

About this capability

Structure responses to referee reports for R&R submissions

What this skill tells your AI

The instructions your AI receives, as published by brycewang-stanford/auto-empirical-research-skills in skills/30-zirui-song-claude-skills/referee-response/SKILL.md and read by ahel’s review.

Help structure and draft responses to referee reports. Ensures consistent formatting and comprehensive responses.


Response Document Structure

RESPONSE TO REFEREE COMMENTS

Paper: [Title]
Authors: [Names]
Journal: [Journal Name]
Manuscript #: [Number]
Date: [Date]

We thank the editor and referees for their constructive comments.
We have carefully addressed all points raised. Below we provide
point-by-point responses. Referee comments are in italics, and
our responses follow in regular text. All page and line numbers
refer to the revised manuscript.

================================================================
RESPONSE TO EDITOR
================================================================

[Editor comments and responses]

================================================================
RESPONSE TO REFEREE 1
================================================================

[Point-by-point responses]

================================================================
RESPONSE TO REFEREE 2
================================================================

[Point-by-point responses]

Point-by-Point Response Template

For each referee comment:

----------------------------------------------------------------
Comment 1.X: [Brief label for reference]
----------------------------------------------------------------

*[Paste exact referee comment in italics]*

RESPONSE:

[Your response here]

- What we did to address the comment
- Where changes appear in the manuscript (page X, lines Y-Z)
- If we added analysis, summarize the results
- If we respectfully disagree, explain why with evidence

CHANGES MADE:
- Page X: [Description of change]
- Table Y: [Description of new/modified table]
- Section Z: [Description of new text]

Response Strategies by Comment Type

Data/Sample Questions

The referee raises an important point about [issue]. We have:
1. [Addressed concern directly]
2. Added robustness tests in Table X showing results hold when [alternative]
3. Discussed this limitation on page Y, lines Z

Identification Concerns

We appreciate this comment on identification. We address this in three ways:
1. Added [placebo test/IV/etc.] in Table X
2. Discussed the assumption more carefully in Section Y
3. Acknowledge remaining limitations on page Z

Requests for Additional Analysis

Thank you for this suggestion. We have added [analysis] in Table X / Figure Y.
The results show [brief summary]. This [strengthens/qualifies] our main findings.

Clarification Requests

We apologize for the lack of clarity. We have revised the text on page X
to clarify that [explanation]. The revised passage now reads:

"[Quote revised text]"

Disagreement (Respectful)

We appreciate this thoughtful comment. After careful consideration, we
respectfully maintain our original approach because:
1. [Reason 1 with evidence/citation]
2. [Reason 2]

However, we have added discussion of this alternative perspective on page X
and include [robustness test] in the appendix to address related concerns.

Change Tracking Summary

Include at the end of your response:

================================================================
SUMMARY OF MAJOR CHANGES
================================================================

1. Added Table X: [Description]
2. Added Figure Y: [Description]
3. Revised Section Z to [description]
4. Added robustness tests for [list]
5. Expanded discussion of [topic] on pages A-B

================================================================
SUPPLEMENTARY MATERIALS ADDED
================================================================

- Online Appendix Table A1: [Description]
- Online Appendix Figure A1: [Description]
- Replication package updated with [additions]

Quick Commands

  • "format referee response" - Set up response document structure
  • "respond to this comment" - Draft response to a specific comment
  • "disagreement response" - Help phrase respectful disagreement
  • "summarize changes" - Generate changes summary from our edits
  • "check completeness" - Verify all comments addressed

Tone Guidelines

Do:

  • Thank referees for specific insights
  • Be concise but thorough
  • Clearly indicate where changes were made
  • Acknowledge valid limitations
  • Cite supporting evidence for your choices

Don't:

  • Be defensive or dismissive
  • Ignore parts of comments
  • Over-explain obvious points
  • Promise future work instead of doing it now
  • Leave any comment unaddressed

Common Phrases

Agreeing:

  • "We thank the referee for this excellent suggestion."
  • "This is an important point that strengthens our analysis."
  • "We have incorporated this suggestion as follows..."

Partial agreement:

  • "We appreciate this comment. While [X], we have [Y]."
  • "This is a valid concern. We address it by..."

Respectful disagreement:

  • "We thank the referee for raising this issue. After careful consideration..."
  • "We respectfully maintain our approach because..."
  • "While we see the merit in this suggestion, we believe..."

Acknowledging limitations:

  • "We acknowledge this limitation and have added discussion on page X."
  • "While ideal data would allow [X], our approach is consistent with [citations]."

Pre-Submission Checklist

Before submitting your response:

  • Every comment has a response (numbered consistently)
  • All page/line references are accurate for revised manuscript
  • New tables/figures are referenced correctly
  • Track changes document is prepared
  • Clean version of manuscript is prepared
  • Supplementary materials are updated
  • Cover letter to editor is drafted
  • Co-authors have reviewed responses

Signals

GitHub stars
4k
Forks
476
Last commit
Sep 2026
Advanced
Catalog kind
skill
Gateway key
referee-response
Source
github.com/brycewang-stanford/auto-empirical-research-skills