ToF-SIMS Analyzer

SkillDev tools

Time-of-Flight Secondary Ion Mass Spectrometry skill for molecular surface analysis and imaging

Instructions available. Your AI can read the instructions. Execution depends on the setup they require.

Add ahel to your AI once: Claude, ChatGPT, Cursor, Claude Code or Codex. Then ask it to use this.

Then ask your AI: use the ToF-SIMS Analyzer skill

What this skill tells your AI

The instructions your AI receives, as published by a5c-ai/babysitter in library/specializations/domains/science/nanotechnology/skills/tof-sims-analyzer/SKILL.md and read by ahel’s review.

Purpose

The ToF-SIMS Analyzer skill provides molecular-level surface analysis capabilities for nanomaterials, enabling identification of surface species, chemical imaging, and depth profiling with high sensitivity.

Capabilities

  • Molecular ion identification
  • Surface contamination analysis
  • 2D and 3D chemical imaging
  • Isotope labeling detection
  • Depth profiling
  • Principal component analysis of spectra

Usage Guidelines

ToF-SIMS Analysis

  1. Spectral Analysis

    • Identify characteristic fragments
    • Build peak lists for materials
    • Apply multivariate analysis
  2. Imaging Mode

    • Optimize spatial resolution
    • Generate chemical maps
    • Correlate with topography
  3. Depth Profiling

    • Select appropriate sputter source
    • Monitor interface sharpness
    • Account for matrix effects

Process Integration

  • Multi-Modal Nanomaterial Characterization Pipeline
  • Nanomaterial Surface Functionalization Pipeline

Input Schema

{
  "sample_id": "string",
  "analysis_mode": "spectral|imaging|depth_profile",
  "primary_ion": "Bi3+|Bi1+|C60+",
  "polarity": "positive|negative",
  "area_of_interest": {"x": "number", "y": "number"}
}

Output Schema

{
  "identified_species": [{
    "mass": "number (amu)",
    "assignment": "string",
    "intensity": "number"
  }],
  "chemical_maps": [{
    "species": "string",
    "image_path": "string"
  }],
  "pca_results": {
    "principal_components": "number",
    "variance_explained": ["number"]
  }
}

Signals

GitHub stars
2k
Forks
112
Last commit
Sep 2026
Advanced
Item type
skill
Key
tof-sims-analyzer
Source
github.com/a5c-ai/babysitter