UCSC Genome Browser Querier Skill

SkillWeb & browsing

UCSC Genome Browser query skill for genome annotation retrieval and track data access

Instructions available. Your AI can read the instructions. Execution depends on the setup they require.

Account requirements not reviewed. Check the skill instructions before use; ahel provides instructions and does not run this skill.

Add ahel to your AI once: Claude, ChatGPT, Cursor, Claude Code or Codex. Then ask it to use this.

Then ask your AI: use the UCSC Genome Browser Querier Skill skill

What this skill tells your AI

The instructions your AI receives, as published by a5c-ai/babysitter in library/specializations/domains/science/bioinformatics/skills/ucsc-genome-browser-querier/SKILL.md and read by ahel’s review.

Purpose

Provide UCSC Genome Browser queries for genome annotation retrieval and track data access.

Capabilities

Track data retrieval
Custom track upload
Genome annotation queries
Conservation score extraction
Table browser queries
bigWig/bigBed handling

Usage Guidelines

Query relevant annotation tracks
Upload custom data for visualization
Extract conservation scores for analysis
Use Table Browser for data extraction
Handle bigWig/bigBed formats efficiently
Document genome assembly versions

Dependencies

UCSC API
kent utilities
pyBigWig

Process Integration

Whole Genome Sequencing Pipeline (wgs-analysis-pipeline)
RNA-seq Differential Expression Analysis (rnaseq-differential-expression)

Signals

GitHub stars: 2k
Forks: 112
Last commit: Sep 2026

Advanced

Item type: skill
Key: ucsc-genome-browser-querier
Source: github.com/a5c-ai/babysitter

github.com/a5c-ai/babysitter